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Genomes: At the edge of chaos with maximum information capacity
Journal
International Journal of Modern Physics B
ISSN
0217-9792
Date Issued
2016-01-20
Author(s)
DOI
http://www.worldscientific.com/doi/10.1142/S0217979215502550
Abstract
<jats:p>We propose an order index, [Formula: see text], which quantifies the notion of “life at the edge of chaos” when applied to genome sequences. It maps genomes to a number from 0 (random and of infinite length) to 1 (fully ordered) and applies regardless of sequence length and base composition. The 786 complete genomic sequences in GenBank were found to have [Formula: see text] values in a very narrow range, 0.037 ± 0.027. We show this implies that genomes are halfway towards being completely random, namely, at the edge of chaos. We argue that this narrow range represents the neighborhood of a fixed-point in the space of sequences, and genomes are driven there by the dynamics of a robust, predominantly neutral evolution process.</jats:p>
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