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An Effective Pre-Processing Phase for Gene Expression Classification
Journal
Indonesian Journal of Electrical Engineering and Computer Science
ISSN
2502-4760
Date Issued
2018-09-01
Author(s)
Choon Sen Seah
Shahreen Kasim
Mohd Farhan Md Fudzee
Mohd Saberi Mohamad
Rd Rohmat Saedudin
Rohayanti Hassan
Mohd Arfian Ismail
Rodziah Atan
DOI
http://doi.org/10.11591/ijeecs.v11.i3.pp1223-1227
Abstract
A raw dataset prepared by researchers comes with a lot of information. Whether the information is usefull or not, completely depends on the requirement and purposes. In machine learning, data pre-processing is the very initial stage. It is a must to make sure the dataset is totally suitable for the requirement. In significant directed random walk (sDRW), there are three steps in data pre-processing stage. First, we remove unwanted attributes, missing value and proper arrangement, followed by normalization of the expression value and lastly, filtering method is applied. The first two steps are completed by Bioconductor package while the last step is works in sDRW.
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